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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs141423516 chr19:43570576 G/C 0.000246 486 15.32 18.93 10.08 KM Plot
THCA rs141430863 chr6:24419514 GAAATA/G 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs141435976 chr7:16459142 T/TTA 1.49E-9 483 15 17.7 19.87 KM Plot
THCA rs141447291 chr10:7866263 CT/C 2.95E-5 484 15.03 17.23 16.28 KM Plot
THCA rs141520237 chr10:81616336 C/G 0 474 15.97 15.9 5.92 KM Plot
THCA rs141546014 chr2:48088088 T/C 5.05E-8 489 15.23 18.9 8.27 KM Plot
THCA rs141810060 chr19:43561955 T/A 0.000237 489 15.3 18.93 10.08 KM Plot
THCA rs141929854 chr4:57198281 G/C 9.52E-8 489 16.22 14.55 12.67 KM Plot
THCA rs142030210 chr16:2931350 G/A 0.000137 487 15.2 17.13 15.4 KM Plot
THCA rs142033032 chr1:119119701 G/A 3.64E-5 490 16.23 15.33 14.57 KM Plot
THCA rs142037328 chr1:16347184 T/C 1.79E-11 482 15.2 18.63 12.63 KM Plot
THCA rs142106827 chr19:43636083 T/C 0.00021 485 15.33 18.03 10.08 KM Plot
THCA rs142196459 chr15:65815828 C/G 0.000141 488 15.3 15.98 18.33 KM Plot
THCA rs142221888 chr4:3342489 A/AGGTGCAGGCC 6.35E-5 473 12.63 16.02 17.08 KM Plot
THCA rs142239882 chr11:77962159 TTA/T 1.86E-5 488 16.4 15.67 12.92 KM Plot